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SRX16114194: GSM6322646: GEF cells, BERTV,Day0 [GEF_3]; Capra hircus; miRNA-Seq
1 ILLUMINA (NextSeq 500) run: 12.3M spots, 613.2M bases, 206.3Mb downloads

External Id: GSM6322646_r1
Submitted by: School of Animal Science and Technology, Guangxi University
Study: Direct Reprogramming of Fibroblasts into Functional Mammary Epithelial cells by small molecules (bulk miRNA-seq)
show Abstracthide Abstract
Mammary epithelial cells (MECs), the only cell type which could be capable of secreting milk in mammary gland, can be applied for the generation of transgenic mammary cell/gland bioreactor. However, continuously achieving large amount of high-quality goat MECs by non-invasion method, especially prepuberal MECs, in vitro has been a challenge. Here, we show that a small molecules cocktail enables the in vitro generation of chemically-induced mammary epithelial cells (CiMECs) with milk-secreting properties from goat ear fibroblasts. The properties of CiMECs were highly similar to those of naturally isolated MECs. Notably, the CiMECs lineage reprogramming process may partially imitate the MECs developmental process from embryonic to milk-secreting stages. Interestingly, fibroblasts were firstly reversed back to embryonic ectoderm/surface ectoderm-like state. Our findings constitute a substantial step toward further promoting the application of transgenic mammary bioreactors, moreover, also offer a new strategy for obtaining other cell types by reprogrammed fibroblasts. Overall design: The six samples are analyzed. BERTV0d are control group with three replicates. BFRTV8d are treatment group with three replicates.
Sample: GEF cells, BERTV,Day0 [GEF_3]
SAMN29630419 • SRS13776800 • All experiments • All runs
Organism: Capra hircus
Library:
Name: GSM6322646
Instrument: NextSeq 500
Strategy: miRNA-Seq
Source: TRANSCRIPTOMIC
Selection: size fractionation
Layout: SINGLE
Construction protocol: Total RNA was extracted from the treated iMECs with BERTV from day 0 and day 8 using TRIzol Reagent according the manufacturer's instructions (Invitrogen) and genomic DNA was removed using DNase I (TaKara). RNA-seq transcriptome library was prepared following TruSeqTM RNA sample preparation Kit from Illumina using 1μg of total RNA.
Runs: 1 run, 12.3M spots, 613.2M bases, 206.3Mb
Run# of Spots# of BasesSizePublished
SRR2007630312,264,972613.2M206.3Mb2024-06-12

ID:
22802619

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